PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS71585.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 300aa    MW: 33213.6 Da    PI: 5.3453
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS71585.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.62.2e-083480255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r +h+e E+rRR++iN++ + L    P     p++K +Ka+ L ++++YI+ Lq
  EPS71585.1 34 RSKHSETEQRRRSKINERQASLS---PF----PAPKRDKASFLLEVIQYIQFLQ 80
                899**************988875...33....689******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.85E-1233104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-133399IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.38E-93484No hitNo description
PfamPF000106.8E-63480IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MVRATSLLED EEAHYSSSPT DCRRADPKVN NVTRSKHSET EQRRRSKINE RQASLSPFPA  60
PKRDKASFLL EVIQYIQFLQ EKLHVYEGSC QGWSPEPSKL LPWKINSGAP VESFADQSHL  120
DRNSMGPEDN AILNPSLLND AHDSVDADLT GATLYNVPDG QQIPTNTLPL NMHLFGDLSS  180
QHHEGGLVGS EHVTHQSQSH DLLMRAREQD CSAPDYPING EELITDSGEA ASISNNCSQR  240
LLSSLVKALQ SSGVDLSQSS ISVQLDIGKQ GHGNVCDVDY ASPTNEEFRH PRKKYRSDQT
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00534DAPTransfer from AT5G38860Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011085580.11e-105PREDICTED: transcription factor BIM2 isoform X2
TrEMBLS8CXB70.0S8CXB7_9LAMI; Uncharacterized protein
STRINGVIT_14s0083g00930.t012e-64(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA89471821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G38860.11e-40BES1-interacting Myc-like protein 3
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]